To use this program, follow these steps:
# Package ID: knb-lter-vcr.148.5 Cataloging System:VCR.
# Data set title: Surface Elevation Data for the Virginia Coast Reserve.
# Data set creator: Dr. Linda Blum -
# Data set creator: Dr. Robert Christian -
# Data set creator: Mark Brinson -
# Data set creator: Ms. Patricia Willis -
# Metadata Provider: - Virginia Coast Reserve Long-Term Ecological Research Project
# Contact: Dr. Linda Blum - - lkb2e@virginia.edu
# Contact: - Information manager - Virginia Coast Reserve Long-Term Ecological Research Project - jporter@lternet.edu
# You should replace 'PUT-LOCAL-PATH-TO-DATA-FILE-HERE' (below) with the appropriate path.
# to your data file (e.g., c:\mydata\datafile.txt).
infile1 <- file("PUT-LOCAL-PATH-TO-DATA-FILE-HERE", open="r")
dataTable1 <-read.csv(infile1,
,sep="\t"
,quot='"'
, col.names=c(
"DATE",
"SITE",
"LEVEL",
"DATATYPE",
"COMMENTS" ), check.names=TRUE)
tmp_var <- character()
tmp_label <- character()
tmp_var <- c(tmp_var , "DATE")
tmp_label <- c(tmp_label , "Date of measurement- ")
tmp_var <- c(tmp_var , "SITE")
tmp_label <- c(tmp_label , "Site Identifier- ")
tmp_var <- c(tmp_var , "LEVEL")
tmp_label <- c(tmp_label , "Change in elevation of sediment surface from initial measurement- cm")
tmp_var <- c(tmp_var , "DATATYPE")
tmp_label <- c(tmp_label , "Method of Measurement- ")
tmp_var <- c(tmp_var , "COMMENTS")
tmp_label <- c(tmp_label , "Comments on data collection- ")
labelFrame1<-data.frame(variable=tmp_var, label=tmp_label)
rm(tmp_var, tmp_label)
tmp_var <- character()
tmp_code <- character()
tmp_label <- character()
tmp_var <- c(tmp_var,"DATATYPE")
tmp_code <- c(tmp_code,"MH")
tmp_label <- c(tmp_label,"Marker Horizon")
tmp_var <- c(tmp_var,"DATATYPE")
tmp_code <- c(tmp_code,"RSET")
tmp_label <- c(tmp_label,"Root Sediment Elevation Table")
tmp_var <- c(tmp_var,"DATATYPE")
tmp_code <- c(tmp_code,"SET")
tmp_label <- c(tmp_label,"Sediment Elevation Table")
codeLabelFrame1 <- data.frame(variable=tmp_var, code=tmp_code, label=tmp_label)
rm(tmp_var, tmp_label, tmp_code)
# HERE IS A LIST OF VARIABLES from dataTable1 AND LABELS FOR THOSE VARIABLES
labelFrame1
# HERE IS A LIST OF VARIABLES TO WHICH CODES HAD BEEN ASSIGNED
codeLabelFrame1
attach(dataTable1)
# The analyses below are basic descriptions of the variables. After testing, they should be replaced.
summary(as.factor(DATE))
summary(as.factor(SITE))
summary(as.factor(DATATYPE))
summary(as.factor(COMMENTS))
summary(as.numeric(LEVEL))